ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wqpA2 - ECOD Domain | ECOD

ECOD/Domains/e2wqpA2

e2wqpA2

UID: 000136390

PDB

Range: A:2-281
PDB: 2WQP chain A(all domains)
UniProt: Q7DDU0 (all domains)
Gene: siaC

Molecule: POLYSIALIC ACID CAPSULE BIOSYNTHESIS PROTEIN SIAC

3D Structure

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Related Domains

Browse other domains in NeuB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNeuB(2002.1.1.109)

Ligands

in contact, ≤ 4 Å

(2S)-2-hydroxybutanedioic acidLMR
MANGANESE (II) IONMN
metal
5-(ACETYLAMINO)-3,5-DIDEOXY-2-O-PHOSPHONO-D-ERYTHRO-L-MANNO-NONONIC ACIDWQP

Pfam Families

NeuB family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2WQP RCSB PDB: 2WQP PDBe: 2WQP UniProt: Q7DDU0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.