ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3hjiA1 - ECOD Domain | ECOD

ECOD/Domains/e3hjiA1

e3hjiA1

UID: 000136520

PDB

Range: A:36-184
PDB: 3HJI chain A(all domains)
UniProt: Q9C3Y6 (all domains)
Gene: vvd

Molecule: Vivid PAS protein VVD

3D Structure

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Related Domains

Browse other domains in PAS_9 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyPAS_9(223.1.1.25)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PAS domain

ClanCL0183PAS_Fold

External Links

ECOD PDB View: 3HJI RCSB PDB: 3HJI PDBe: 3HJI UniProt: Q9C3Y6

Downloads

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