ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3hzlA2 - ECOD Domain | ECOD

ECOD/Domains/e3hzlA2

e3hzlA2

UID: 000136773

PDB

Range: A:2-220,A:328-389
PDB: 3HZL chain A(all domains)
UniProt: Q9X9P9 (all domains)
Gene: nikD

Molecule: NikD protein

3D Structure

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Related Domains

Browse other domains in DAO, NAD_binding_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyDAO, NAD_binding_8(2003.1.2.60)

Ligands

in contact, ≤ 4 Å

Picolinic acid6PC
drugDrugBank DB05483
Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

PF13450NAD_binding_8

NAD(P)-binding Rossmann-like domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3HZL RCSB PDB: 3HZL PDBe: 3HZL UniProt: Q9X9P9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.