ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3fdcA1 - ECOD Domain | ECOD

ECOD/Domains/e3fdcA1

e3fdcA1

UID: 000137318

PDB

Range: A:4-123
PDB: 3FDC chain A(all domains)
UniProt: P02701 (all domains)
Gene: AVD

Molecule: Avidin

3D Structure

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Related Domains

Browse other domains in Avidin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAvidin/Streptavidin(9.2)

TT-groupAvidin/Streptavidin(9.2.1)

FFamilyAvidin(9.2.1.1)

Ligands

in contact, ≤ 4 Å

iron(II) tetracyano-5-(2-Oxo-hexahydro-thieno[3,4-d]imidazol-6-yl)-pentanoic acid (4'-methyl-[2,2']bipyridinyl-4-ylmethyl)-amideBTF

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Avidin family

External Links

ECOD PDB View: 3FDC RCSB PDB: 3FDC PDBe: 3FDC UniProt: P02701

Downloads

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