ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kv1A1 - ECOD Domain | ECOD

ECOD/Domains/e3kv1A1

e3kv1A1

UID: 000137561

PDB

Range: A:6-262
PDB: 3KV1 chain A(all domains)
UniProt: Q5E0H6 (all domains)
Gene: lsrR

Molecule: Transcriptional repressor

3D Structure

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Related Domains

Browse other domains in Sugar-bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilySugar-bind(2003.1.7.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04198Sugar-bind

Putative sugar-binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3KV1 RCSB PDB: 3KV1 PDBe: 3KV1 UniProt: Q5E0H6

Downloads

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