ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3l11A1 - ECOD Domain | ECOD

ECOD/Domains/e3l11A1

e3l11A1

UID: 000137842

RepresentativePDB

Range: A:0-112
PDB: 3L11 chain A(all domains)
UniProt: Q8IYW5 (all domains)
Gene: RNF168

Molecule: E3 ubiquitin-protein ligase RNF168

3D Structure

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Related Domains

Browse other domains in Prok-RING_4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyProk-RING_4(376.1.1.24)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14447Prok-RING_4

Prokaryotic RING finger family 4

ClanCL0229RING

External Links

ECOD PDB View: 3L11 RCSB PDB: 3L11 PDBe: 3L11 UniProt: Q8IYW5

Downloads

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