ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ibaA1 - ECOD Domain | ECOD

ECOD/Domains/e3ibaA1

e3ibaA1

UID: 000138000

PDB

Range: A:1-362
PDB: 3IBA chain A(all domains)
UniProt: Q95WL3 (all domains)
Gene: C3747_22g238

Molecule: Farnesyl pyrophosphate synthase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

Zoledronic acidZOL
drugDrugBank DB00399
ISOPENTENYL PYROPHOSPHATEIPE
drugDrugBank DB04714within 5 Å only

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 3IBA RCSB PDB: 3IBA PDBe: 3IBA UniProt: Q95WL3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.