ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lmcA1 - ECOD Domain | ECOD

ECOD/Domains/e3lmcA1

e3lmcA1

UID: 000138155

RepresentativePDB

Range: A:2-192
PDB: 3LMC chain A(all domains)
UniProt: A2SQK8 (all domains)
Gene: Mlab_0438

Molecule: Peptidase, zinc-dependent

3D Structure

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Related Domains

Browse other domains in Peptidase_M54 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M54(2498.1.1.35)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07998Peptidase_M54

Peptidase family M54

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3LMC RCSB PDB: 3LMC PDBe: 3LMC UniProt: A2SQK8

Downloads

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