ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3a9fA1 - ECOD Domain | ECOD

ECOD/Domains/e3a9fA1

e3a9fA1

UID: 000138371

RepresentativePDB

Range: A:129-206
PDB: 3A9F chain A(all domains)
UniProt: O07091 (all domains)
Gene: pscC

Molecule: Cytochrome c

3D Structure

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Related Domains

Browse other domains in Cytochrome-c551 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrome-c551(107.1.1.8)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317

+ 4 additives (Heptaethylene glycol, Triethylene glycol, Sulfate ion, …)

Heptaethylene glycolP33
DrugBank DB03394

Pfam Families

PF10643Cytochrome-c551

Photosystem P840 reaction-centre cytochrome c-551

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 3A9F RCSB PDB: 3A9F PDBe: 3A9F UniProt: O07091

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Triethylene glycolPGE

DrugBank DB02327

Sulfate ionSO4

DrugBank DB14546

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.