ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2x1wA1 - ECOD Domain | ECOD

ECOD/Domains/e2x1wA1

e2x1wA1

UID: 000138424

PDB

Range: A:116-213
PDB: 2X1W chain A(all domains)
UniProt: P49767 (all domains)
Gene: VEGFC

Molecule: VASCULAR ENDOTHELIAL GROWTH FACTOR C

3D Structure

Loading viewer...

Related Domains

Browse other domains in PDGF →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCystine-knot cytokines(385)

HH-groupCystine-knot cytokines(385.1)

TT-groupCystine-knot cytokines(385.1.1)

FFamilyPDGF(385.1.1.5)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
Cesium ionCS
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PDGF/VEGF domain

ClanCL0079Cystine-knot

External Links

ECOD PDB View: 2X1W RCSB PDB: 2X1W PDBe: 2X1W UniProt: P49767

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure