ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3wonB1 - ECOD Domain | ECOD

ECOD/Domains/e3wonB1

e3wonB1

UID: 001385429

PDB

Range: B:25-276,B:574-721
PDB: 3WON chain B(all domains)
UniProt: V5YM14 (all domains)
Gene: dapb2

Molecule: dipeptidyl aminopeptidase BII

3D Structure

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Related Domains

Browse other domains in Peptidase_S46 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHelical bundle domain in S46 peptidase(6151)

HH-groupHelical bundle domain in S46 peptidase(6151.1)

TT-groupHelical bundle domain in S46 peptidase(6151.1.1)

FFamilyPeptidase_S46(6151.1.1.1)

Ligands

in contact, ≤ 4 Å

TyrosineTYR
drugDrugBank DB00135
ValineVAL
drugDrugBank DB00161
Zinc ion

Pfam Families

PF10459Peptidase_S46

Peptidase S46

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 3WON RCSB PDB: 3WON PDBe: 3WON UniProt: V5YM14

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.