ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3b9qA2 - ECOD Domain | ECOD

ECOD/Domains/e3b9qA2

e3b9qA2

UID: 001385807

PDB

Range: A:151-366
PDB: 3B9Q chain A(all domains)
UniProt: O80842 (all domains)
Gene: CPFTSY

Molecule: Chloroplast SRP receptor homolog, alpha subunit CPFTSY

3D Structure

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Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3B9Q RCSB PDB: 3B9Q PDBe: 3B9Q UniProt: O80842

Downloads

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