ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lm8A1 - ECOD Domain | ECOD

ECOD/Domains/e3lm8A1

e3lm8A1

UID: 000138632

PDB

Range: A:2-132
PDB: 3LM8 chain A(all domains)
UniProt: O34664 (all domains)
Gene: thiN

Molecule: Thiamine pyrophosphokinase

3D Structure

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Related Domains

Browse other domains in TPK_catalytic →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin pyrophosphokinase, catalytic domain(7562)

HH-groupThiamin pyrophosphokinase, catalytic domain(7562.1)

TT-groupThiamin pyrophosphokinase, catalytic domain(7562.1.1)

FFamilyTPK_catalytic(7562.1.1.1)

Ligands

in contact, ≤ 4 Å

ThiamineVIB
drugDrugBank DB00152
Magnesium ionMG
metal

+ 1 additive (Phosphate ion)

Pfam Families

PF04263TPK_catalytic

Thiamin pyrophosphokinase, catalytic domain

ClanCL0948GT29-like

External Links

ECOD PDB View: 3LM8 RCSB PDB: 3LM8 PDBe: 3LM8 UniProt: O34664

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.