ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3afrA1 - ECOD Domain | ECOD

ECOD/Domains/e3afrA1

e3afrA1

UID: 000138690

PDB

Range: A:123-420
PDB: 3AFR chain A(all domains)
UniProt: P13053 (all domains)
Gene: Vdr

Molecule: Vitamin D3 receptor

3D Structure

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Related Domains

Browse other domains in Hormone_recep →

Classification

AArchitecturealpha arrays(a.6)

XX-groupNuclear receptor ligand-binding domain(188)

HH-groupNuclear receptor ligand-binding domain(188.1)

TT-groupNuclear receptor ligand-binding domain(188.1.1)

FFamilyHormone_recep(188.1.1.1)

Ligands

in contact, ≤ 4 Å

(1R,3S,5Z)-5-[(2E)-2-{(1R,3aS,7aR)-1-[(1R,2S,4R)-2-butyl-4-hydroxy-1,5-dimethylhexyl]-7a-methyloctahydro-4H-inden-4-ylidene}ethylidene]-4-methylidenecyclohexane-1,3-diolICJ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00104Hormone_recep

Ligand-binding domain of nuclear hormone receptor

External Links

ECOD PDB View: 3AFR RCSB PDB: 3AFR PDBe: 3AFR UniProt: P13053

Downloads

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