ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1n52A2 - ECOD Domain | ECOD

ECOD/Domains/e1n52A2

e1n52A2

UID: 001387298

PDB

Range: A:481-665,A:687-790
PDB: 1N52 chain A(all domains)
UniProt: Q09161 (all domains)
Gene: NCBP1

Molecule: 80 kDa nuclear cap binding protein

3D Structure

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Related Domains

Browse other domains in MIF4G_like_2 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyMIF4G_like_2(109.4.1.128)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09090MIF4G_like_2

MIF4G like

ClanCL0020TPR

External Links

ECOD PDB View: 1N52 RCSB PDB: 1N52 PDBe: 1N52 UniProt: Q09161

Downloads

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