ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4prxA1 - ECOD Domain | ECOD

ECOD/Domains/e4prxA1

e4prxA1

UID: 001388837

PDB

Range: A:221-377
PDB: 4PRX chain A(all domains)
UniProt: P0AES6 (all domains)
Gene: gyrB

Molecule: GyrB

3D Structure

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Related Domains

Browse other domains in DNA_gyraseB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyDNA_gyraseB(212.1.1.2)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833within 5 Å only

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Pfam Families

PF00204DNA_gyraseB

DNA gyrase B

ClanCL0329S5

External Links

ECOD PDB View: 4PRX RCSB PDB: 4PRX PDBe: 4PRX UniProt: P0AES6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.