ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ptxB1 - ECOD Domain | ECOD

ECOD/Domains/e4ptxB1

e4ptxB1

UID: 001388844

PDB

Range: B:4-448
PDB: 4PTX chain B(all domains)
UniProt: B8CYA8 (all domains)
Gene: Hore_15280

Molecule: Glycoside hydrolase family 1

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_1(2002.1.1.12)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00232Glyco_hydro_1

Glycosyl hydrolase family 1

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4PTX RCSB PDB: 4PTX PDBe: 4PTX UniProt: B8CYA8

Downloads

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