ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4tmwB1 - ECOD Domain | ECOD

ECOD/Domains/e4tmwB1

e4tmwB1

UID: 001388945

PDB

Range: B:514-744
PDB: 4TMW chain B(all domains)
UniProt: G0S8G9 (all domains)
Gene: CTHT_0029840

Molecule: eIF5B

3D Structure

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Related Domains

Browse other domains in GTP_EFTU →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGTP_EFTU(2004.1.1.14)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Magnesium ionMG
metal
Sodium ion

Pfam Families

PF00009GTP_EFTU

Elongation factor Tu GTP binding domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4TMW RCSB PDB: 4TMW PDBe: 4TMW UniProt: G0S8G9

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.