ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4tmzA1 - ECOD Domain | ECOD

ECOD/Domains/e4tmzA1

e4tmzA1

UID: 001388953

PDB

Range: A:515-744
PDB: 4TMZ chain A(all domains)
UniProt: G0S8G9 (all domains)
Gene: CTHT_0029840

Molecule: eIF5B

3D Structure

Loading viewer...

Related Domains

Browse other domains in GTP_EFTU →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGTP_EFTU(2004.1.1.14)

Ligands

in contact, ≤ 4 Å

5'-Guanosine-Diphosphate-MonothiophosphateGSP
drugDrugBank DB01864
Potassium ionK
metal
Magnesium ion

Pfam Families

PF00009GTP_EFTU

Elongation factor Tu GTP binding domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4TMZ RCSB PDB: 4TMZ PDBe: 4TMZ UniProt: G0S8G9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.