ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4us4A1 - ECOD Domain | ECOD

ECOD/Domains/e4us4A1

e4us4A1

UID: 001389066

PDB

Range: A:17-449
PDB: 4US4 chain A(all domains)
UniProt: Q9KDT3 (all domains)
Gene: BH1128

Molecule: TRANSPORTER

3D Structure

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Related Domains

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Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilySNF(5051.1.1.1)

Ligands

in contact, ≤ 4 Å

TryptophanTRP
drugDrugBank DB00150
(2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE78M
(2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE78N

Pfam Families

Sodium:neurotransmitter symporter family

ClanCL0062APC

External Links

ECOD PDB View: 4US4 RCSB PDB: 4US4 PDBe: 4US4 UniProt: Q9KDT3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.