ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4c2yB2 - ECOD Domain | ECOD

ECOD/Domains/e4c2yB2

e4c2yB2

UID: 001389253

PDB

Range: B:296-496
PDB: 4C2Y chain B(all domains)
UniProt: P30419 (all domains)
Gene: NMT1

Molecule: GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 1

3D Structure

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Related Domains

Browse other domains in NMT_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyNMT_C(213.1.1.9)

Ligands

in contact, ≤ 4 Å

Myristoyl-CoaMYA
drugDrugBank DB02180

+ 2 additives (Citric acid, Glycerol)

Citric acidCIT
DrugBank DB04272within 5 Å only

Pfam Families

Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 4C2Y RCSB PDB: 4C2Y PDBe: 4C2Y UniProt: P30419

Downloads

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GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.