ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r7tB1 - ECOD Domain | ECOD

ECOD/Domains/e4r7tB1

e4r7tB1

UID: 001389743

PDB

Range: B:1-266
PDB: 4R7T chain B(all domains)
UniProt: Q9KKS5 (all domains)
Gene: nagB

Molecule: Glucosamine-6-phosphate deaminase

3D Structure

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Related Domains

Browse other domains in Glucosamine_iso →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilyGlucosamine_iso(2003.1.7.4)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01182Glucosamine_iso

Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4R7T RCSB PDB: 4R7T PDBe: 4R7T UniProt: Q9KKS5

Downloads

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