ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ad9B1 - ECOD Domain | ECOD

ECOD/Domains/e3ad9B1

e3ad9B1

UID: 001390221

PDB

Range: B:1-241,B:331-397
PDB: 3AD9 chain B(all domains)
UniProt: Q50LF2 (all domains)
Gene: soxB

Molecule: SARCOSINE OXIDASE BETA SUBUNIT

3D Structure

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Related Domains

Browse other domains in DAO, NAD_binding_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyDAO, NAD_binding_8(2003.1.2.60)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Flavin mononucleotideFMN
drugDrugBank DB03247

+ 1 additive (Sulfate ion)

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

PF13450NAD_binding_8

NAD(P)-binding Rossmann-like domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3AD9 RCSB PDB: 3AD9 PDBe: 3AD9 UniProt: Q50LF2

Downloads

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Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.