ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dkqB1 - ECOD Domain | ECOD

ECOD/Domains/e3dkqB1

e3dkqB1

UID: 001391164

PDB

Range: B:1-180
PDB: 3DKQ chain B(all domains)
UniProt: A3D8P6 (all domains)
Gene: Sbal_3634

Molecule: PKHD-type hydroxylase Sbal_3634

3D Structure

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Related Domains

Browse other domains in 2OG-FeII_Oxy_3 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamily2OG-FeII_Oxy_3(10.12.1.53)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metal

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF136402OG-FeII_Oxy_3

2OG-Fe(II) oxygenase superfamily

ClanCL0029Cupin

External Links

ECOD PDB View: 3DKQ RCSB PDB: 3DKQ PDBe: 3DKQ UniProt: A3D8P6

Downloads

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