ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lifA2 - ECOD Domain | ECOD

ECOD/Domains/e3lifA2

e3lifA2

UID: 000139134

RepresentativePDB

Range: A:43-73,A:190-285
PDB: 3LIF chain A(all domains)
UniProt: Q6N3S7 (all domains)
Gene: RPA3616

Molecule: Putative diguanylate cyclase (GGDEF) with PAS/PAC domain

3D Structure

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Related Domains

Browse other domains in dCache_1_like →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilydCache_1_like(223.1.1.50)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22588dCache_1_like

Histidine kinase sensor domain

ClanCL0165Cache

External Links

ECOD PDB View: 3LIF RCSB PDB: 3LIF PDBe: 3LIF UniProt: Q6N3S7

Downloads

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