ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ei8B2 - ECOD Domain | ECOD

ECOD/Domains/e3ei8B2

e3ei8B2

UID: 001391423

PDB

Range: B:19-57,B:328-426
PDB: 3EI8 chain B(all domains)
UniProt: Q93ZN9 (all domains)
Gene: DAP

Molecule: LL-diaminopimelate aminotransferase

3D Structure

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Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyAminotran_1_2(3016.1.1.1)

Ligands

in contact, ≤ 4 Å

(2S,6S)-2-amino-6-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}heptanedioic acidPL5

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 3EI8 RCSB PDB: 3EI8 PDBe: 3EI8 UniProt: Q93ZN9

Downloads

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