ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3mb5A2 - ECOD Domain | ECOD

ECOD/Domains/e3mb5A2

e3mb5A2

UID: 000139162

PDB

Range: A:1-61
PDB: 3MB5 chain A(all domains)
UniProt: Q9V1J7 (all domains)
Gene: trmI

Molecule: SAM-dependent methyltransferase

3D Structure

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Related Domains

Browse other domains in TrmI-like_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFKBP-like(284)

HH-groupFKBP-like(284.1)

TT-groupFKBP-like(284.1.1)

FFamilyTrmI-like_N(284.1.1.9)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14801TrmI-like_N

TrmI-like N-terminal

ClanCL0487FKBP

External Links

ECOD PDB View: 3MB5 RCSB PDB: 3MB5 PDBe: 3MB5 UniProt: Q9V1J7

Downloads

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