ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2hmaA3 - ECOD Domain | ECOD

ECOD/Domains/e2hmaA3

e2hmaA3

UID: 001392385

PDB

Range: A:2-206
PDB: 2HMA chain A(all domains)
UniProt: Q97T38 (all domains)
Gene: mnmA

Molecule: Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

3D Structure

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Related Domains

Browse other domains in tRNA_Me_trans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA_Me_trans(2005.1.1.23)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03054tRNA_Me_trans

tRNA methyl transferase HUP domain

ClanCL0039HUP

External Links

ECOD PDB View: 2HMA RCSB PDB: 2HMA PDBe: 2HMA UniProt: Q97T38

Downloads

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