ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1i3qB5 - ECOD Domain | ECOD

ECOD/Domains/e1i3qB5

e1i3qB5

UID: 001392610

PDB

Range: B:20-138,B:164-218,B:405-541
PDB: 1I3Q chain B(all domains)
UniProt: P08518 (all domains)
Gene: RPB2

Molecule: DNA-DIRECTED RNA POLYMERASE II 140KD POLYPEPTIDE

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010)

HH-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1)

TT-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1.1)

FFamilyRNA_pol_Rpb2_1,RNA_pol_Rpb2_3(4010.1.1.2)

Pfam Families

PF04563RNA_pol_Rpb2_1

RNA polymerase beta subunit

PF04565RNA_pol_Rpb2_3

RNA polymerase Rpb2, domain 3

External Links

ECOD PDB View: 1I3Q RCSB PDB: 1I3Q PDBe: 1I3Q UniProt: P08518

Downloads

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