ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4in6H1 - ECOD Domain | ECOD

ECOD/Domains/e4in6H1

e4in6H1

UID: 001392891

PDB

Range: H:11-35
PDB: 4IN6 chain H(all domains)
UniProt: Q3J170 (all domains)
Gene: puhA

Molecule: Reaction center protein H chain

3D Structure

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Related Domains

Browse other domains in PRCH →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction centre subunit H, transmembrane region(5002)

HH-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1)

TT-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1.1)

FFamilyPRCH(5002.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
NONADEC-10-ENOIC ACID2-[3,4-DIHYDROXY-6-HYDROXYMETHYL-5-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-TETRAHYDRO-PYRAN-2-YLOXY]-1-OCTADEC-9-ENOYLOXYMETHYL-ETHYL ESTERGGD

Pfam Families

Photosynthetic reaction centre, H-chain N-terminal region

ClanCL0350PRC-barrel

External Links

ECOD PDB View: 4IN6 RCSB PDB: 4IN6 PDBe: 4IN6 UniProt: Q3J170

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Dodecyldimethylamine N-oxide, Glycerol)

Dodecyldimethylamine N-oxideLDA
DrugBank DB04147
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.