ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jk1C3 - ECOD Domain | ECOD

ECOD/Domains/e4jk1C3

e4jk1C3

UID: 001393239

PDB

Range: C:8-152,C:450-577
PDB: 4JK1 chain C(all domains)
UniProt: P0A8V2 (all domains)
Gene: rpoB

Molecule: Escherichia coli RNA polymerase beta subunit

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010)

HH-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1)

TT-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1.1)

FFamilyRNA_pol_Rpb2_1,RNA_pol_Rpb2_3(4010.1.1.2)

Pfam Families

PF04563RNA_pol_Rpb2_1

RNA polymerase beta subunit

PF04565RNA_pol_Rpb2_3

RNA polymerase Rpb2, domain 3

External Links

ECOD PDB View: 4JK1 RCSB PDB: 4JK1 PDBe: 4JK1 UniProt: P0A8V2

Downloads

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