ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2vl1C2 - ECOD Domain | ECOD

ECOD/Domains/e2vl1C2

e2vl1C2

UID: 001396096

PDB

Range: C:28-247,C:364-458
PDB: 2VL1 chain C(all domains)
UniProt: Q96W94 (all domains)
Gene: PYD3

Molecule: BETA-ALANINE SYNTHASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M20, Peptidase_M28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M20, Peptidase_M28(2011.1.1.20)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01546Peptidase_M20

Peptidase family M20/M25/M40

ClanCL0865ZnExoPePases

PF04389Peptidase_M28

Peptidase family M28

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 2VL1 RCSB PDB: 2VL1 PDBe: 2VL1 UniProt: Q96W94

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure