ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4oqtA1 - ECOD Domain | ECOD

ECOD/Domains/e4oqtA1

e4oqtA1

UID: 001397250

PDB

Range: A:3-390
PDB: 4OQT chain A(all domains)
UniProt: Q96FE5 (all domains)
Gene: LINGO1

Molecule: Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1

3D Structure

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Related Domains

Browse other domains in LRR_1, LRR_5, LRR_8 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1, LRR_5, LRR_8(207.1.1.130)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

BspA type Leucine rich repeat region (6 copies)

ClanCL0022LRR

Leucine rich repeat

ClanCL0022LRR

External Links

ECOD PDB View: 4OQT RCSB PDB: 4OQT PDBe: 4OQT UniProt: Q96FE5

Downloads

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