ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pmeA1 - ECOD Domain | ECOD

ECOD/Domains/e4pmeA1

e4pmeA1

UID: 001397754

PDB

Range: A:9-125
PDB: 4PME chain A(all domains)
UniProt: P02766 (all domains)
Gene: TTR

Molecule: Transthyretin

3D Structure

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Related Domains

Browse other domains in Transthyretin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupPrealbumin-like(11.1.4)

FFamilyTransthyretin(11.1.4.1)

Ligands

in contact, ≤ 4 Å

(1Z,4Z,6E)-5-hydroxy-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,4,6-trien-3-oneCUR
Sodium ionNA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF00576Transthyretin

HIUase/Transthyretin family

ClanCL0287Transthyretin

External Links

ECOD PDB View: 4PME RCSB PDB: 4PME PDBe: 4PME UniProt: P02766

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.