ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4w50D1 - ECOD Domain | ECOD

ECOD/Domains/e4w50D1

e4w50D1

UID: 001398171

PDB

Range: D:28-204
PDB: 4W50 chain D(all domains)
UniProt: P54764 (all domains)
Gene: EPHA4

Molecule: Ephrin type-A receptor 4

3D Structure

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Related Domains

Browse other domains in Ephrin_lbd →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyEphrin_lbd(10.32.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((S)-butane-1,3-diol, Glycerin)

(S)-butane-1,3-diolBU2
DrugBank DB02202
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01404Ephrin_lbd

Ephrin receptor ligand binding domain

ClanCL0202GBD

External Links

ECOD PDB View: 4W50 RCSB PDB: 4W50 PDBe: 4W50 UniProt: P54764

Downloads

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