ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ndoA1 - ECOD Domain | ECOD

ECOD/Domains/e3ndoA1

e3ndoA1

UID: 000139929

PDB

Range: A:3-227
PDB: 3NDO chain A(all domains)
UniProt: A0QQY7 (all domains)
Gene: deoC

Molecule: Deoxyribose-phosphate aldolase

3D Structure

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Related Domains

Browse other domains in DeoC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDeoC(2002.1.1.76)

Ligands

in contact, ≤ 4 Å

Unknown ligandUNL

+ 2 additives (Glycerin, Ammonium ion)

GlycerinGOL
DrugBank DB09462
Ammonium ionNH4

Pfam Families

DeoC/LacD family aldolase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3NDO RCSB PDB: 3NDO PDBe: 3NDO UniProt: A0QQY7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.