ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kpzA1 - ECOD Domain | ECOD

ECOD/Domains/e4kpzA1

e4kpzA1

UID: 001400535

PDB

Range: A:252-453
PDB: 4KPZ chain A(all domains)
UniProt: P43889 (all domains)
Gene: glmU

Molecule: Bifunctional protein GlmU

3D Structure

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Related Domains

Browse other domains in Hexapep, GMPPB_C →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep, GMPPB_C(208.1.1.20)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (Tetraethylene glycol, Sulfate ion)

Tetraethylene glycolPG4
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00132Hexapep

Bacterial transferase hexapeptide (six repeats)

ClanCL0536HEXAPEP

PF25087GMPPB_C

GMPPB C-terminal domain

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 4KPZ RCSB PDB: 4KPZ PDBe: 4KPZ UniProt: P43889

Downloads

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