ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nruB1 - ECOD Domain | ECOD

ECOD/Domains/e4nruB1

e4nruB1

UID: 001400578

PDB

Range: B:385-488
PDB: 4NRU chain B(all domains)
UniProt: Q80J95 (all domains)
Gene: ORF1

Molecule: RNA dependent RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyRdRP_1(4967.1.1.2)

Ligands

in contact, ≤ 4 Å

4-({4-methyl-3-[(3-nitrobenzoyl)amino]benzoyl}amino)naphthalene-1,5-disulfonic acid2NG
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4NRU RCSB PDB: 4NRU PDBe: 4NRU UniProt: Q80J95

Downloads

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