ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4k6uC1 - ECOD Domain | ECOD

ECOD/Domains/e4k6uC1

e4k6uC1

UID: 001401663

PDB

Range: C:183-365
PDB: 4K6U chain C(all domains)
UniProt: Q64823 (all domains)
Gene: L5

Molecule: Fiber protein

3D Structure

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Related Domains

Browse other domains in Adeno_knob →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupDomain in virus attachment proteins(5092)

HH-groupDomain in virus attachment proteins(5092.1)

TT-groupDomain in virus attachment proteins(5092.1.1)

FFamilyAdeno_knob(5092.1.1.1)

Ligands

in contact, ≤ 4 Å

N-acetyl-alpha-neuraminic acidSIA
drugDrugBank DB03721
Zinc ionZN
metal
3,3',3''-[nitrilotris(methanediyl-1H-1,2,3-triazole-4,1-diyl)]tripropan-1-ol

Pfam Families

PF00541Adeno_knob

Adenoviral fibre protein (knob domain)

ClanCL0326Reo_sigma

External Links

ECOD PDB View: 4K6U RCSB PDB: 4K6U PDBe: 4K6U UniProt: Q64823

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.