ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qxeA1 - ECOD Domain | ECOD

ECOD/Domains/e4qxeA1

e4qxeA1

UID: 001401897

PDB

Range: A:25-467
PDB: 4QXE chain A(all domains)
UniProt: Q4G1L2 (all domains)
Gene: VLRB

Molecule: Leucine-rich repeat-containing G-protein coupled receptor 4, linker, Variable lymphocyte receptor B

3D Structure

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Related Domains

Browse other domains in LRR_1, LRRNT, LRR_5, LRR_6, LRR_8, LRR_9 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1, LRRNT, LRR_5, LRR_6, LRR_8, LRR_9(207.1.1.241)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Chloride ionCL

+ 2 additives (Glycerin, Sulfate ion)

Glycerin

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

Leucine rich repeat N-terminal domain

BspA type Leucine rich repeat region (6 copies)

ClanCL0022LRR

Leucine Rich repeat

ClanCL0022LRR

Leucine rich repeat

External Links

ECOD PDB View: 4QXE RCSB PDB: 4QXE PDBe: 4QXE UniProt: Q4G1L2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

ClanCL0022LRR

Leucine-rich repeat

ClanCL0022LRR