ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3obrA1 - ECOD Domain | ECOD

ECOD/Domains/e3obrA1

e3obrA1

UID: 000140489

PDB

Range: A:863-1079
PDB: 3OBR chain A(all domains)
UniProt: P19321 (all domains)
Gene: botD

Molecule: Botulinum neurotoxin type D

3D Structure

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Related Domains

Browse other domains in Toxin_R_bind_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyToxin_R_bind_N(10.1.1.25)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07953Toxin_R_bind_N

Clostridium neurotoxin, N-terminal receptor binding

ClanCL0004Concanavalin

External Links

ECOD PDB View: 3OBR RCSB PDB: 3OBR PDBe: 3OBR UniProt: P19321

Downloads

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