ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3obrA2 - ECOD Domain | ECOD

ECOD/Domains/e3obrA2

e3obrA2

UID: 000140490

PDB

Range: A:1070-1276
PDB: 3OBR chain A(all domains)
UniProt: P19321 (all domains)
Gene: botD

Molecule: Botulinum neurotoxin type D

3D Structure

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Related Domains

Browse other domains in Toxin_R_bind_C →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyToxin_R_bind_C(6.1.1.13)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07951Toxin_R_bind_C

Clostridium neurotoxin, C-terminal receptor binding

ClanCL0066Trefoil

External Links

ECOD PDB View: 3OBR RCSB PDB: 3OBR PDBe: 3OBR UniProt: P19321

Downloads

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