ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4uqlA2 - ECOD Domain | ECOD

ECOD/Domains/e4uqlA2

e4uqlA2

UID: 001405708

PDB

Range: A:3-176
PDB: 4UQL chain A(all domains)
UniProt: P18187 (all domains)
Gene: hydA

Molecule: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA

3D Structure

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Related Domains

Browse other domains in Oxidored_q6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyOxidored_q6(2007.1.3.3)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145
Iron/sulfur clusterSF4
FE3-S4 CLUSTERF3S

Pfam Families

PF01058Oxidored_q6

NADH ubiquinone oxidoreductase, 20 Kd subunit

ClanCL0304CheY

External Links

ECOD PDB View: 4UQL RCSB PDB: 4UQL PDBe: 4UQL UniProt: P18187

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.