ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4o4rC2 - ECOD Domain | ECOD

ECOD/Domains/e4o4rC2

e4o4rC2

UID: 001406033

PDB

Range: C:5-381
PDB: 4O4R chain C(all domains)
UniProt: Q80J95 (all domains)
Gene: ORF1

Molecule: RNA-dependent-RNA-polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_1(304.48.1.8)

Ligands

in contact, ≤ 4 Å

3-[(E)-{4-formyl-5-hydroxy-6-methyl-3-[(phosphonooxy)methyl]pyridin-2-yl}diazenyl]-7-nitronaphthalene-1,5-disulfonicacid20V

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4O4R RCSB PDB: 4O4R PDBe: 4O4R UniProt: Q80J95

Downloads

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