ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4q1eA1 - ECOD Domain | ECOD

ECOD/Domains/e4q1eA1

e4q1eA1

UID: 001406076

PDB

Range: A:20-260
PDB: 4Q1E chain A(all domains)
UniProt: P27707 (all domains)
Gene: DCK

Molecule: Deoxycytidine kinase

3D Structure

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Related Domains

Browse other domains in dNK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilydNK(2004.1.1.70)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
(S)-2-((1-(2-(3-(2-fluoroethoxy)-4-methoxyphenyl)-5-methylthiazol-4-yl)ethyl)thio)pyrimidine-4,6-diamine2Y7
(R)-2-((1-(2-(3-(2-fluoroethoxy)-4-methoxyphenyl)-5-methylthiazol-4-yl)ethyl)thio)pyrimidine-4,6-diamine

Pfam Families

Deoxynucleoside kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4Q1E RCSB PDB: 4Q1E PDBe: 4Q1E UniProt: P27707

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.