ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qbbA1 - ECOD Domain | ECOD

ECOD/Domains/e4qbbA1

e4qbbA1

UID: 001406097

PDB

Range: A:29-187
PDB: 4QBB chain A(all domains)
UniProt: P03305 (all domains)

Molecule: Leader protease

3D Structure

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Related Domains

Browse other domains in Peptidase_C28 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C28(219.1.1.30)

Ligands

in contact, ≤ 4 Å

N~2~-[(3S)-4-({(2R)-1-[(4-carbamimidamidobutyl)amino]-4-methyl-1-oxopentan-2-yl}amino)-3-hydroxy-4-oxobutanoyl]-L-arginyl-L-prolinamideE69
Potassium ionK
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05408Peptidase_C28

Foot-and-mouth virus L-proteinase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4QBB RCSB PDB: 4QBB PDBe: 4QBB UniProt: P03305

Downloads

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