ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4uuyA1 - ECOD Domain | ECOD

ECOD/Domains/e4uuyA1

e4uuyA1

UID: 001406536

RepresentativePDB

Range: A:2-349
PDB: 4UUY chain A(all domains)
UniProt: P27801 (all domains)
Gene: PEP3

Molecule: VACUOLAR MEMBRANE PROTEIN PEP3

3D Structure

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Related Domains

Browse other domains in Pep3_Vps18 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyPep3_Vps18(5.1.4.21)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05131Pep3_Vps18

Pep3/Vps18/deep orange beta-propeller domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4UUY RCSB PDB: 4UUY PDBe: 4UUY UniProt: P27801

Downloads

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