ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pkrA1 - ECOD Domain | ECOD

ECOD/Domains/e4pkrA1

e4pkrA1

UID: 001406752

PDB

Range: A:551-776
PDB: 4PKR chain A(all domains)
UniProt: P15917 (all domains)
Gene: lef

Molecule: Lethal factor

3D Structure

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Related Domains

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Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyATLF(2498.1.1.34)

Ligands

in contact, ≤ 4 Å

N~2~-benzyl-N~2~-[(4-fluoro-3-methylphenyl)sulfonyl]-N-hydroxy-D-alaninamide2ZL
Zinc ionZN
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Anthrax toxin lethal factor, N- and C-terminal domain

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 4PKR RCSB PDB: 4PKR PDBe: 4PKR UniProt: P15917

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.