ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4um8A1 - ECOD Domain | ECOD

ECOD/Domains/e4um8A1

e4um8A1

UID: 001407019

PDB

Range: A:1-439
PDB: 4UM8 chain A(all domains)
UniProt: P06756 (all domains)
Gene: ITGAV

Molecule: INTEGRIN ALPHA-V

3D Structure

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Related Domains

Browse other domains in FG-GAP →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyFG-GAP(5.1.4.13)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
Calcium ionCA
metal
Chloride ion

Pfam Families

FG-GAP repeat

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4UM8 RCSB PDB: 4UM8 PDBe: 4UM8 UniProt: P06756

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.