ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4um8A2 - ECOD Domain | ECOD

ECOD/Domains/e4um8A2

e4um8A2

UID: 001407020

PDB

Range: A:439-594
PDB: 4UM8 chain A(all domains)
UniProt: P06756 (all domains)
Gene: ITGAV

Molecule: INTEGRIN ALPHA-V

3D Structure

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Related Domains

Browse other domains in Integrin_A_Ig_1 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIntegrin_A_Ig_1(11.1.1.112)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
NICKEL (II) IONNI
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF08441Integrin_A_Ig_1

Integrin alpha Ig-like domain 1

ClanCL0159E-set

External Links

ECOD PDB View: 4UM8 RCSB PDB: 4UM8 PDBe: 4UM8 UniProt: P06756

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.